Published on Graduate Programs in Bioinformatics (https://www.uoguelph.ca/bioinformatics)

Home > Shape landmark detection through computer vision

Shape landmark detection through computer vision

Advisor:
Dirk Steinke (IB)

Geometric morphometrics is the statistical analysis of shape using landmark coordinates. Those landmark coordinates can come from various sources and are usually captured manually using a digitizing tablet or by measuring an image using software. There have been a few attempts to find shape landmarks automatically through computer vision and this project will make use of such tools to build a pipeline that automatically retrieves shape landmarks as well as basic morphometric measurements from a stack of images retrieved from the Barcode of Life Datasystems (BOLD) database.

Prospective students could work on the following aspects of the project:

  • Automatic shape recognition of pre-filtered image sets (Arthopods)
  • Landmark setting (including orientation correction)
  • Basic automatic measurements (length, width of specimens)
Page category: 
Research Project [1]

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Source URL: https://www.uoguelph.ca/bioinformatics/shape-landmark-detection-through-computer-vision

Links
[1] https://www.uoguelph.ca/bioinformatics/page-category/research-project